Notebook Images

GO parents

GO parents

Nature paper GOEA results

All Cellular Components

Big messy spaghetti plot. Molecular function and Biological process plots are bigger and messier.
Colors indicate GOEA pvalues:

  • pval < 0.005 (light red)

  • pval < 0.01 (light orange)

  • pval < 0.05 (yellow) BIG PLOT

A subplot of GOEA results

As well as printing the big plot shown above. You can also create a sub-plot.
Study gene counts are annotated to plots. e.g, 32 genes Gene Counts

A subplot of GOEA results

Instead of gene counts, shows a sampling of study gene Symbols on GO term boxes.
e.g., 32 genes; Ayh, Csdel, Eef2 Gene Symbols