goatools.anno.extensions.extensions module

Annotation Extension for relational expressions.

https://link.springer.com/protocol/10.1007/978-1-4939-3743-1_17

Correlated function associations between genes and GOs containing contextual information.

With contextual information identify gene products that perform a role:
  • only under certain conditions

  • in the presence of specific factors

Gene products can have different roles:
  • in different cells

  • in different tissues

class goatools.anno.extensions.extensions.AnnotationExtensions(extensions)[source]

Bases: object

A collection of annotation extensions for one gene product.

get_relations_cnt()[source]

Get the set of all relations.